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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913296.1_cds_XP_016463350.1_56480
CDS Infomation

[gene=LOC107786397] [db_xref=GeneID:107786397] [protein=lysosomal beta glucosidase-like] [protein_id=XP_016463350.1] [location=complement(join(84038..84543,85083..85287,85398..85580,86068..86172,86275..86518,86856..86998,87152..87242,88021..88454))] [gbkey=CDS]
Sequence

ATGAGATCAAGAATTGCAATCCCTATATTGGGACTTCTGATATTATTCTCTGCGTGGGAA
GCATGCATGGCAGAAGGAGATTACTTGATTTACAAGGATCCTACGAAGCCGCTAAATATA
CGTATAAGGGATCTAATGAGTCGAATGACATTGGCAGAAAAAATAGGGCAGATGACACAG
CTCGATAGAAGAATTTTGACATCGCAAATTATGAAAGATTATGGAATTGGTAGTGTACTG
AGTGGTGGAGGAAGTGTGCCAAAACCTGAAGCGACAGCCCGAGAATGGGTTGATATGGTG
AATGAGTTTCAAAAGGGAGCATTATCTACTAGGCTTGGGATCCCTATGATTTATGGGATT
GATGCAGTTCATGGACATAATAATGTTTATAAGGCTACTGTTTTTCCTCATAATGTTGGC
CTTGGTGCAACCAGAGATCCAGACCTTGTGAAAAGAATTGGTGCAGCAACTGCTCTTGAA
GTTAGAGCTACTGGCATTCAATATGTTTTTGCTCCATGCATCGCGGTATGCAGAGATCCA
AGATGGGGTAGGTGCTATGAAAGTTACAGCGAGGATCCAGAAATTGTGAAACAAATGACT
GAAATTATCCCTGGATTACAAGGGGACCATCCTCCTCGTAAAGCAGGCATTCCTTATGTA
GCTGGAAAGGAAAAAGTAGCAGCTTGTGCAAAACACTTTGTTGGAGATGGTGGTACAACA
AAAGGGATCAATGAGAATAATACAGTGACAGATTGGCATACATTGCTAAGTATTCACATG
CCTGGTTATTATCAATCAATTATCAAAGGAGTTTCAACTGTTATGGTGTCTTATTCAAGT
TGGAATGGTGTCAAGATGCATGCACATCATAATCTTGTTACCAATTTCCTCAAGGATACC
TTAAAATTCAGGGGATTTGTCATCTCCGATTGGCAAGGAATTGACAAAATAACTTCACCA
CCTCATGCAAATTACACACATTCAGTGCTCACTGGGGTTCAAGCCGGCATTGACATGATT
ATGGTCCCTCTAAACCATACGGAATTTATTGATATATTGACCTCGTTGGTGAATAATAAT
TTTATTCCCATGAGCCGAATTGATGATGCAGTGAGGAGGATCTTGAGAGTCAAATTTACC
ATGGGTCTTTTTGAGAATCCTTTGGCTGATTATAGATTAGTTAAACATCTCGGAAGCCAG
GCACATAGAGATTTGGCAAGAGAAGCAGTAAGAAAATCACTAGTATTACTGAAGAATGGG
GCAAATGCAGATGAGCCTGTACTTCCACTGCCTAAGAAGGCAACACGAATATTAGTGGCT
GGATCTCATGCCAACAATTTGGGCTATCAATGTGGTGGTTGGACTATTACTTGGCAAGGA
GTTGAAGGAAACAATGTCACACTTGGGACAACCATTTTGGATGCTATAACTGCTACCGTT
GATCCAAGCACAGAAGTAGTCTACAGTGAAAATCCGACCACAGAATTTATGGAATCCAAC
AAATTCTCATACGCAATAGTGGTAGTAGGTGAACTACCTTATGCTGAAACAGCAGGAGAC
AGCTTGAACTTAACTATTCCTGAGCAAGGAATAACAACAATGAACAATGTCTGTGGAAGT
ATAAAATGTGTAGTGGTTTTAATTTCAGGGAGGCCATTAGTTGTGCAACCACATTTAAGT
AACATTGATTCACTTGTTGCTGCTTGGTTACCTGGTACTGAAGGACAAGGAGTTGCTGAT
GTATTATTTGGTGATTATGAGTTTACTGGAAAATTGTCAAGAACTTGGTTCAAGACTGTG
AACCAATTGCCAATGAATGTTGGTGATTCACACTATGATCCACTTTTCCCATTTGGGTTT
GGACTTACTACTACGGCTACTAAAGCCCAGGACCAAATTGCTTCTAGATAG

Peptide Sequence

PEP ID

XP_016463350.1
PEP Infomation

PREDICTED: lysosomal beta glucosidase-like [Nicotiana tabacum]
Sequence

MRSRIAIPILGLLILFSAWEACMAEGDYLIYKDPTKPLNIRIRDLMSRMTLAEKIGQMTQ
LDRRILTSQIMKDYGIGSVLSGGGSVPKPEATAREWVDMVNEFQKGALSTRLGIPMIYGI
DAVHGHNNVYKATVFPHNVGLGATRDPDLVKRIGAATALEVRATGIQYVFAPCIAVCRDP
RWGRCYESYSEDPEIVKQMTEIIPGLQGDHPPRKAGIPYVAGKEKVAACAKHFVGDGGTT
KGINENNTVTDWHTLLSIHMPGYYQSIIKGVSTVMVSYSSWNGVKMHAHHNLVTNFLKDT
LKFRGFVISDWQGIDKITSPPHANYTHSVLTGVQAGIDMIMVPLNHTEFIDILTSLVNNN
FIPMSRIDDAVRRILRVKFTMGLFENPLADYRLVKHLGSQAHRDLAREAVRKSLVLLKNG
ANADEPVLPLPKKATRILVAGSHANNLGYQCGGWTITWQGVEGNNVTLGTTILDAITATV
DPSTEVVYSENPTTEFMESNKFSYAIVVVGELPYAETAGDSLNLTIPEQGITTMNNVCGS
IKCVVVLISGRPLVVQPHLSNIDSLVAAWLPGTEGQGVADVLFGDYEFTGKLSRTWFKTV
NQLPMNVGDSHYDPLFPFGFGLTTTATKAQDQIASR

Transcript Sequence

Gene sequence data has not been registered.